B dj!@sddZddlZddlmZmZddlmZddlZ ddl m Z ddl m Z ddZdd Zd d ZdS) z PSD Variation N)rfftirfft) TimeSeries)resample_to_delta_tc Cstj|dt||ddd}d|dd|dd}|ddd|k}|||dd|<g}td |} xDtt||dD],} |t|| | | t| |qW|S) a Calculate mean square of given time series once per stride First of all this function calculate the mean square of given time series once per short_stride. This is used to find and remove outliers due to short glitches. Here an outlier is defined as any element which is greater than two times the average of its closest neighbours. Every outlier is substituted with the average of the corresponding adjacent elements. Then, every second the function compute the mean square of the smoothed time series, within the stride. Parameters ---------- data : numpy.ndarray delta_t : float Duration of the time series srate : int Sample rate of the data were it given as a TimeSeries short_stride : float Stride duration for outlier removal stride ; float Stride duration Returns ------- m_s: List Mean square of given time series )Zaxisg?Ng@g?)numpyZmeanZreshapeintrangeappend) datadelta_tsrateZ short_strideZstrideZshort_msZaveZoutliersZm_sZinv_timeindexr`/work/yifan.wang/ringdown/master-ringdown-env/lib/python3.7/site-packages/pycbc/psd/variation.py mean_square s  rc Cs|jdkrtj} n|jdkr"tj} t|j} t|j} t|d}t|j } d} d}t | | |d||| }t j d| ||gdd | dd }| t|| tt|}g}x|D]}||t| kr ||||}tjj|t||j t||j |d }n@||| }tjj|| || t||j t||j |d }|}tj|j| d }|}|d |t|}d|d<tt|dt|dd}||}td| t|}d|d<t t|| tt||t|d| }t j||dd}|t|| t||  }t||j}t||| ||}|tj||j d qWt!t"|| | ||d}|S)a Calculates time series of PSD variability This function first splits the segment up into 512 second chunks. It then calculates the PSD over this 512 second. The PSD is used to to create a filter that is the composition of three filters: 1. Bandpass filter between f_low and f_high. 2. Weighting filter which gives the rough response of a CBC template. 3. Whitening filter. Next it makes the convolution of this filter with the stretch of data. This new time series is given to the "mean_square" function, which computes the mean square of the timeseries within an 8 seconds window, once per second. The result, which is the variance of the S/N in that stride for the Parseval theorem, is then stored in a timeseries. Parameters ---------- strain : TimeSeries Input strain time series to estimate PSDs segment : {float, 8} Duration of the segments for the mean square estimation in seconds. short_segment : {float, 0.25} Duration of the short segments for the outliers removal. psd_long_segment : {float, 512} Duration of the long segments for PSD estimation in seconds. psd_duration : {float, 8} Duration of FFT segments for long term PSD estimation, in seconds. psd_stride : {float, 4} Separation between FFT segments for long term PSD estimation, in seconds. psd_avg_method : {string, 'median'} Method for averaging PSD estimation segments. low_freq : {float, 20} Minimum frequency to consider the comparison between PSDs. high_freq : {float, 480} Maximum frequency to consider the comparison between PSDs. Returns ------- psd_var : TimeSeries Time series of the variability in the PSD estimation Zsingledoubleg@?g?g @rFhann)Z pass_zeroZwindowZnyq)Zseg_lenZ seg_strideZ avg_method)dtypeggrgg@Zsame)mode)repoch)# precisionr Zfloat32Zfloat64float start_timeend_timerr sample_rateZarangesigZfirwinresizeabsrZ time_slicepycbcZpsdZwelcharrayZsample_frequenciessqrtsumlenrZrollrZ fftconvolverrr rrZ concatenate)ZstrainsegmentZ short_segmentZpsd_long_segmentZ psd_durationZ psd_strideZpsd_avg_methodZlow_freqZ high_freqZfs_dtyperrrstepZ strain_cropZ times_longZfiltZ psd_var_listZtlongZastrainZplongZfreqsZfweightZnormZfwhitenZ full_filtZwstrainrZ variationpsd_varrrrcalc_filt_psd_variation>sf.                r+cCsN|||}t|ds@ddlm}|j|j|ddd|_||}|S)a Find the PSD variation value at a particular time with the filter method. If the time is outside the timeseries bound, 1. is given. Parameters ---------- psd_var : TimeSeries Time series of the varaibility in the PSD estimation idx : numpy.ndarray Time indices of the triggers start : float GPS start time sample_rate : float Sample rate defined in ini file Returns ------- vals : Array PSD variation value at a particular time cached_psd_var_interpolantr) interpolateg?F)Z fill_valueZ bounds_error)hasattrZscipyr-Zinterp1dZ sample_timesr r,)r*idxstartrtimer-valsrrrfind_trigger_values     r3)__doc__r Z numpy.fftrrZ scipy.signalsignalr Z pycbc.psdr#Z pycbc.typesrZ pycbc.filterrrr+r3rrrrs   1~