B }d.@srdZddlZddlmZddlmZddlmZddl m Z ddl m Z d d l mZd Zd gZGd d d eZdS)z:This module provides a spectral-variation histogram class N)registry)Quantity)Array2D) null_slice)Segment)FrequencySeriesz(Duncan Macleod SpectralVariancecs6eZdZdZejdZejZeZd&fdd Ze ddZ e j ddZ e j d dZ e d d Z e d d Ze ddZe ddZe ejjejjejjdZe ejjejjejjdZe ejjejjejjddZe ddZeddZddZfddZejje_eddZ d d!Z!d'fd$d% Z"Z#S)(r zhA 2-dimensional array containing the variance histogram of a frequency-series `FrequencySeries` )binsNc  s^|dk r|| d<|dk r || d<|dk r0|| d<tt|j||f|||| d| } || _| S)z2Generate a new SpectralVariance histogram Nx0dxxindex)unitnamechannelepoch)superr__new__r ) clsdatar rf0df frequenciesrrrkwargsnew) __class__f/work/yifan.wang/ringdown/master-ringdown-env/lib/python3.7/site-packages/gwpy/frequencyseries/hist.pyr,szSpectralVariance.__new__cCs|jS)zbArray of bin edges, including the rightmost edge :type: `astropy.units.Quantity` )_bins)selfrrrr EszSpectralVariance.binscCs>|dkr|`dSt|}|j|jddkr4td||_dS)NrzSpectralVariance.bins must be given as a list of bin edges, including the rightmost edge, and have length 1 greater than the y-axis of the SpectralVariance data)r rsizeshape ValueErrorr)r r rrrr MscCs"y|`Wntk rYnXdS)N)rAttributeError)r rrrr ZscCs|jddS)z.List of left-hand amplitude bin edges N)r )r rrryindexbszSpectralVariance.yindexcCst|jjd|jjdS)z:Amplitude range (low, high) spanned by this array rr%)rr value)r rrryspanhszSpectralVariance.yspancCs|jd|jdS)z7Size of the first (lowest value) amplitude bin rr)r )r rrrdynszSpectralVariance.dycCs |jdS)zAStarting value of the first (lowert value) amplitude bin r)r )r rrry0tszSpectralVariance.y0zStarting frequency for this `Spectrogram` This attributes is recorded as a :class:`~astropy.units.quantity.Quantity` object, assuming a unit of 'Hertz'. zFrequency spacing of this `Spectogram` This attributes is recorded as a :class:`~astropy.units.quantity.Quantity` object, assuming a unit of 'Hertz'. z$Array of frequencies for each sample)fgetfsetfdeldoccCstdt|jddS)Nztransposing a z is not supported)NotImplementedErrortype__name__)r rrrTszSpectralVariance.TcOstj||f||S)aRead data into a `SpectralVariance` Arguments and keywords depend on the output format, see the online documentation for full details for each format, the parameters below are common to most formats. Parameters ---------- source : `str`, `list` Source of data, any of the following: - `str` path of single data file, - `str` path of LAL-format cache file, - `list` of paths. *args Other arguments are (in general) specific to the given ``format``. format : `str`, optional Source format identifier. If not given, the format will be detected if possible. See below for list of acceptable formats. **kwargs Other keywords are (in general) specific to the given ``format``. Raises ------ IndexError if ``source`` is an empty list Notes -----) io_registryread)rsourceargsrrrrr4s$zSpectralVariance.readcOstj||f||S)aWrite this `SpectralVariance` to a file Arguments and keywords depend on the output format, see the online documentation for full details for each format, the parameters below are common to most formats. Parameters ---------- target : `str` output filename format : `str`, optional output format identifier. If not given, the format will be detected if possible. See below for list of acceptable formats. Notes -----)r3write)r targetr6rrrrr7szSpectralVariance.writecs.t|trt|dr"t|StddS)Nrz)cannot slice SpectralVariance across bins) isinstancetuplerr __getitem__r/)r item)rrrr;s zSpectralVariance.__getitem__c Os2|s td|dd}|dd}|dd}|dd}|dd }|d d }|d d } |rp| rptd |d } tdd|D} |dkrR|dkr|rt| d}n$|dkr| d}n|rt|}|dkr|rt| d}n(|dkr| d}n|r"t|}|r>tj|||dd}ntj|||dd}|j d}|| j } t | j d|f} xt | j dD]v}tj| dd|f|| d\| |ddf<}|r| |ddfr| |ddf| |ddf<qW| jd}|| | | j|| j| j| jd}|S)a*Calculate a new `SpectralVariance` from a :class:`~gwpy.spectrogram.Spectrogram` Parameters ---------- spectrogram : `~gwpy.spectrogram.Spectrogram` input `Spectrogram` data bins : `~numpy.ndarray`, optional array of histogram bin edges, including the rightmost edge low : `float`, optional left edge of lowest amplitude bin, only read if ``bins`` is not given high : `float`, optional right edge of highest amplitude bin, only read if ``bins`` is not given nbins : `int`, optional number of bins to generate, only read if ``bins`` is not given, default: `500` log : `bool`, optional calculate amplitude bins over a logarithmic scale, only read if ``bins`` is not given, default: `False` norm : `bool`, optional normalise bin counts to a unit sum, default: `False` density : `bool`, optional normalise bin counts to a unit integral, default: `False` Returns ------- specvar : `SpectralVariance` 2D-array of spectral frequency-amplitude counts See also -------- numpy.histogram The histogram function z"Must give at least one Spectrogramr NlowhighnbinsilogFnormdensityzsz5SpectralVariance.from_spectrogram..rr)num)rBz variance)rrrrr)r#popnumpyZvstacklog10minmaxZlogspaceZlinspacer!rzerosr"rangeZ histogramsumrrrrr)rZ spectrogramsrr r=r>r?r@rArBZ spectrogramrZqbinsoutirrrrrfrom_spectrogramsT.               .   z!SpectralVariance.from_spectrogramc Cs|j\}}t|}xLt|D]@}t|j|ddf}t||}|j|}|||<qW|j d|d} t ||j |j |jdd| dS)aCalculate a given spectral percentile for this `SpectralVariance` Parameters ---------- percentile : `float` percentile (0 - 100) of the bins to compute Returns ------- spectrum : `~gwpy.frequencyseries.FrequencySeries` the given percentile `FrequencySeries` calculated from this `SpectralVaraicence` N z % percentiler%)rrrr) r"rHrLrMZcumsumr'absZargminr rr rr) r percentilerowscolumnsrOrPZ cumsumvalsZminindexvalrrrrrT>s     zSpectralVariance.percentiler@ pcolormeshc s~|dkr$tdt|jd|d|jj}t|dkrbttjt |dddrb| dd |j ||d t j f|S) NZimshowz plotting a z with z() is not supportedrr)nZyscaler@)methodxscale) TypeErrorr0r1r r'rHallZallclosediffrI setdefaultupdaterplot)r r[rZrr )rrrra\s zSpectralVariance.plot)NNNNNNN)r@rX)$r1 __module__ __qualname____doc__r Z_metadata_slotsZ_default_xunitZ _rowclassrpropertyr setterdeleterr&r(r)r*rr __get____set__ __delete__rr rrrr2 classmethodr4r7r;rQrTra __classcell__rr)rrr $s@         &   a)rdrHZ astropy.iorr3Z astropy.unitsrtypesrZtypes.sliceutilsrsegmentsrr __author____all__r rrrrs